Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Colca2F8VPY8 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.1□□□□□ -0.63
Colca2F8VPY8 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Gm8111-201ENSMUST00000117659 987 ntBASIC11.1□□□□□ -0.63
Colca2F8VPY8 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Gm11960-201ENSMUST00000122068 925 ntBASIC11.1□□□□□ -0.63
Colca2F8VPY8 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.1□□□□□ -0.63
Colca2F8VPY8 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.1□□□□□ -0.63
Colca2F8VPY8 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Gm9372-201ENSMUST00000168454 430 ntBASIC11.1□□□□□ -0.63
Colca2F8VPY8 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Colca2F8VPY8 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Gm43547-201ENSMUST00000197729 328 ntBASIC11.1□□□□□ -0.63
Colca2F8VPY8 Gm30946-201ENSMUST00000198288 724 ntBASIC11.1□□□□□ -0.63
Colca2F8VPY8 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
Colca2F8VPY8 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.1□□□□□ -0.63
Colca2F8VPY8 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Colca2F8VPY8 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.09□□□□□ -0.63
Colca2F8VPY8 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Gm23745-201ENSMUST00000104230 125 ntBASIC11.09□□□□□ -0.63
Colca2F8VPY8 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Gm13284-201ENSMUST00000121020 547 ntBASIC11.09□□□□□ -0.63
Colca2F8VPY8 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Gm7939-201ENSMUST00000201233 1050 ntBASIC11.09□□□□□ -0.63
Colca2F8VPY8 BC080696-201ENSMUST00000202858 1218 ntBASIC11.09□□□□□ -0.63
Colca2F8VPY8 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Gm4903-201ENSMUST00000210462 405 ntBASIC11.09□□□□□ -0.63
Colca2F8VPY8 Gm45527-201ENSMUST00000211052 774 ntBASIC11.09□□□□□ -0.63
Colca2F8VPY8 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Colca2F8VPY8 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Gm18065-201ENSMUST00000221395 526 ntBASIC11.09□□□□□ -0.63
Colca2F8VPY8 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Colca2F8VPY8 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Colca2F8VPY8 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC11.09□□□□□ -0.63
Colca2F8VPY8 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms