Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ube4aE9Q735 n-R5s211-201ENSMUST00000093689 119 ntBASIC14.13□□□□□ -0.15
Ube4aE9Q735 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4aE9Q735 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4aE9Q735 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4aE9Q735 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4aE9Q735 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4aE9Q735 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4aE9Q735 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4aE9Q735 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.13□□□□□ -0.15
Ube4aE9Q735 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4aE9Q735 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4aE9Q735 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.12□□□□□ -0.15
Ube4aE9Q735 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Gm11500-201ENSMUST00000118237 601 ntBASIC14.12□□□□□ -0.15
Ube4aE9Q735 Gm11700-201ENSMUST00000119409 403 ntBASIC14.12□□□□□ -0.15
Ube4aE9Q735 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Mir6407-201ENSMUST00000184510 101 ntBASIC14.12□□□□□ -0.15
Ube4aE9Q735 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC14.12□□□□□ -0.15
Ube4aE9Q735 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC14.12□□□□□ -0.15
Ube4aE9Q735 CT009536.2-201ENSMUST00000225370 665 ntBASIC14.12□□□□□ -0.15
Ube4aE9Q735 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ube4aE9Q735 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Gm17213-201ENSMUST00000165161 1360 ntBASIC14.11□□□□□ -0.15
Ube4aE9Q735 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Gm25063-201ENSMUST00000104666 94 ntBASIC14.11□□□□□ -0.15
Ube4aE9Q735 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Gm4993-201ENSMUST00000118719 1174 ntBASIC14.11□□□□□ -0.15
Ube4aE9Q735 Gm16219-201ENSMUST00000120096 274 ntBASIC14.11□□□□□ -0.15
Ube4aE9Q735 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Gm19046-201ENSMUST00000221263 1298 ntBASIC14.11□□□□□ -0.15
Ube4aE9Q735 AC122346.3-201ENSMUST00000223983 306 ntBASIC14.11□□□□□ -0.15
Ube4aE9Q735 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ube4aE9Q735 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4aE9Q735 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ube4aE9Q735 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Ube4aE9Q735 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4aE9Q735 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4aE9Q735 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4aE9Q735 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4aE9Q735 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ube4aE9Q735 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms