Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Gm9796-201ENSMUST00000062249 2250 ntBASIC6.36□□□□□ -1.39
Herc1E9PZP8 Gm46992-201ENSMUST00000222120 1389 ntBASIC6.36□□□□□ -1.39
Herc1E9PZP8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Phyhd1-203ENSMUST00000113643 1195 ntTSL 5 BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Gm14332-201ENSMUST00000121982 899 ntBASIC6.36□□□□□ -1.39
Herc1E9PZP8 Gm11686-201ENSMUST00000122397 333 ntBASIC6.36□□□□□ -1.39
Herc1E9PZP8 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Gm6286-201ENSMUST00000145247 762 ntBASIC6.36□□□□□ -1.39
Herc1E9PZP8 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Gm38004-201ENSMUST00000192972 357 ntBASIC6.36□□□□□ -1.39
Herc1E9PZP8 Ryk-ps1-201ENSMUST00000219713 235 ntBASIC6.36□□□□□ -1.39
Herc1E9PZP8 Olfr17-201ENSMUST00000098138 948 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Gm8302-201ENSMUST00000119217 852 ntBASIC6.36□□□□□ -1.39
Herc1E9PZP8 Gm12297-201ENSMUST00000121380 979 ntBASIC6.36□□□□□ -1.39
Herc1E9PZP8 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Nps-203ENSMUST00000210907 1206 ntTSL 5 BASIC6.36□□□□□ -1.39
Herc1E9PZP8 AC116589.8-201ENSMUST00000220945 364 ntTSL 2 BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Gm6682-201ENSMUST00000169666 1346 ntBASIC6.36□□□□□ -1.39
Herc1E9PZP8 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Gm13347-201ENSMUST00000120298 1353 ntBASIC6.36□□□□□ -1.39
Herc1E9PZP8 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Gm43134-201ENSMUST00000199434 1886 ntBASIC6.36□□□□□ -1.39
Herc1E9PZP8 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Gm21963-201ENSMUST00000179519 330 ntBASIC6.36□□□□□ -1.39
Herc1E9PZP8 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 AC124555.1-201ENSMUST00000227051 880 ntBASIC6.36□□□□□ -1.39
Herc1E9PZP8 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Herc1E9PZP8 C330021F23Rik-202ENSMUST00000136592 1621 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Herc1E9PZP8 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Gm8038-201ENSMUST00000164674 2044 ntBASIC6.35□□□□□ -1.39
Herc1E9PZP8 Ccdc65-201ENSMUST00000003444 1890 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Herc1E9PZP8 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Gm8809-201ENSMUST00000119367 743 ntBASIC6.35□□□□□ -1.39
Herc1E9PZP8 Gm14010-201ENSMUST00000131961 374 ntTSL 2 BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Gm18339-201ENSMUST00000218074 888 ntBASIC6.35□□□□□ -1.39
Herc1E9PZP8 Elobl-201ENSMUST00000061938 819 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Gm15953-201ENSMUST00000117656 1732 ntBASIC6.35□□□□□ -1.39
Herc1E9PZP8 Pms2-202ENSMUST00000110709 1386 ntTSL 5 BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Gm29245-201ENSMUST00000187332 1416 ntBASIC6.35□□□□□ -1.39
Herc1E9PZP8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Herc1E9PZP8 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Herc1E9PZP8 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Gm12338-201ENSMUST00000122170 192 ntBASIC6.35□□□□□ -1.39
Herc1E9PZP8 Gimd1-205ENSMUST00000212852 1234 ntTSL 5 BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Arl15-202ENSMUST00000224068 1002 ntBASIC6.35□□□□□ -1.39
Herc1E9PZP8 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Herc1E9PZP8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms