Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.67□□□□□ -0.54
Srp54bE9PXC0 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Gm44124-201ENSMUST00000204159 472 ntBASIC11.67□□□□□ -0.54
Srp54bE9PXC0 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Srp54bE9PXC0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.66□□□□□ -0.54
Srp54bE9PXC0 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Gm11949-201ENSMUST00000117640 372 ntBASIC11.66□□□□□ -0.54
Srp54bE9PXC0 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Gm43186-201ENSMUST00000198130 824 ntBASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Gm6450-201ENSMUST00000200896 574 ntBASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Gm2517-201ENSMUST00000215651 348 ntBASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Srp54bE9PXC0 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srp54bE9PXC0 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srp54bE9PXC0 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srp54bE9PXC0 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srp54bE9PXC0 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.65□□□□□ -0.54
Srp54bE9PXC0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Srp54bE9PXC0 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms