Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Gm28043E0CXC2 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Gm25214-201ENSMUST00000104573 129 ntBASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Gm6621-201ENSMUST00000193251 772 ntBASIC11.86□□□□□ -0.51
Gm28043E0CXC2 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Gm28043E0CXC2 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Gm26956-201ENSMUST00000182176 986 ntBASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Gm27516-201ENSMUST00000184237 98 ntBASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Mir8109-201ENSMUST00000184375 117 ntBASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Gm28882-201ENSMUST00000185504 314 ntBASIC11.85□□□□□ -0.51
Gm28043E0CXC2 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Gm38266-201ENSMUST00000194931 421 ntBASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Gm42937-201ENSMUST00000197360 752 ntBASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Gm28043E0CXC2 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms