Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Mir449b-201ENSMUST00000104833 80 ntBASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Gm42550-201ENSMUST00000201553 960 ntBASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 AC153380.1-201ENSMUST00000214959 2364 ntBASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nkx6-2D3Z4R4 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Gm13437-201ENSMUST00000122434 1981 ntBASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Gm42427-201ENSMUST00000200473 5292 ntBASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Dysf-215ENSMUST00000204591 6641 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Gm27321-201ENSMUST00000185021 205 ntBASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Gm5264-201ENSMUST00000190584 848 ntBASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Gm5035-201ENSMUST00000215581 927 ntBASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 AC073947.2-201ENSMUST00000215888 1130 ntBASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Gm19680-201ENSMUST00000095050 1513 ntBASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Gm11735-201ENSMUST00000106377 1581 ntBASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nkx6-2D3Z4R4 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Nkx6-2D3Z4R4 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nkx6-2D3Z4R4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nkx6-2D3Z4R4 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC9.49□□□□□ -0.89
Nkx6-2D3Z4R4 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nkx6-2D3Z4R4 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nkx6-2D3Z4R4 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nkx6-2D3Z4R4 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nkx6-2D3Z4R4 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nkx6-2D3Z4R4 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nkx6-2D3Z4R4 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Nkx6-2D3Z4R4 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nkx6-2D3Z4R4 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
Nkx6-2D3Z4R4 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nkx6-2D3Z4R4 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.49□□□□□ -0.89
Nkx6-2D3Z4R4 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nkx6-2D3Z4R4 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Nkx6-2D3Z4R4 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms