Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Gm10305-201ENSMUST00000195331 2475 ntBASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Hfm1D3Z4R1 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Gm15625-201ENSMUST00000117617 1093 ntBASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Gm13094-201ENSMUST00000117930 409 ntBASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Gm3828-201ENSMUST00000121817 257 ntBASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Gm5342-201ENSMUST00000181982 1003 ntBASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Gm7192-201ENSMUST00000210793 1137 ntBASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 AC122891.1-201ENSMUST00000218671 268 ntBASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Gm44913-201ENSMUST00000208060 2990 ntBASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Hfm1D3Z4R1 Gm15519-201ENSMUST00000120088 1566 ntBASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Gm24279-201ENSMUST00000104236 131 ntBASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Gm19013-201ENSMUST00000183895 1222 ntBASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Gm19014-201ENSMUST00000184828 1189 ntBASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Gm20781-201ENSMUST00000193154 693 ntBASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Gm21736-201ENSMUST00000195399 693 ntBASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Gm5171-201ENSMUST00000214944 1415 ntBASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 AC138329.2-201ENSMUST00000225579 1842 ntBASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hfm1D3Z4R1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Gm16547-201ENSMUST00000159474 293 ntBASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Gm17796-201ENSMUST00000189015 1213 ntBASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Gm8384-201ENSMUST00000190905 704 ntBASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 AC152169.1-201ENSMUST00000223901 701 ntBASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Gm25580-201ENSMUST00000083409 327 ntBASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms