Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chd3B1AR17 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Chd3B1AR17 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.57□□□□□ -0.56
Chd3B1AR17 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.57□□□□□ -0.56
Chd3B1AR17 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chd3B1AR17 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Chd3B1AR17 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Chd3B1AR17 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Chd3B1AR17 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Chd3B1AR17 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Chd3B1AR17 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.56□□□□□ -0.56
Chd3B1AR17 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.56□□□□□ -0.56
Chd3B1AR17 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.56□□□□□ -0.56
Chd3B1AR17 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.56□□□□□ -0.56
Chd3B1AR17 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chd3B1AR17 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.56□□□□□ -0.56
Chd3B1AR17 Gm2875-201ENSMUST00000211333 360 ntBASIC11.56□□□□□ -0.56
Chd3B1AR17 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.56□□□□□ -0.56
Chd3B1AR17 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.56□□□□□ -0.56
Chd3B1AR17 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd3B1AR17 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd3B1AR17 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Chd3B1AR17 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Chd3B1AR17 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd3B1AR17 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd3B1AR17 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.56□□□□□ -0.56
Chd3B1AR17 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd3B1AR17 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chd3B1AR17 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chd3B1AR17 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd3B1AR17 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd3B1AR17 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd3B1AR17 Gm14071-201ENSMUST00000117817 509 ntBASIC11.56□□□□□ -0.56
Chd3B1AR17 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.56□□□□□ -0.56
Chd3B1AR17 Gm6108-201ENSMUST00000208365 367 ntBASIC11.56□□□□□ -0.56
Chd3B1AR17 Gm4978-201ENSMUST00000071565 801 ntBASIC11.56□□□□□ -0.56
Chd3B1AR17 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd3B1AR17 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Chd3B1AR17 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd3B1AR17 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd3B1AR17 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Chd3B1AR17 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd3B1AR17 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Chd3B1AR17 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.56□□□□□ -0.56
Chd3B1AR17 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Chd3B1AR17 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Chd3B1AR17 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.56□□□□□ -0.56
Chd3B1AR17 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.55□□□□□ -0.56
Chd3B1AR17 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Chd3B1AR17 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Chd3B1AR17 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Gm9062-201ENSMUST00000117712 727 ntBASIC11.55□□□□□ -0.56
Chd3B1AR17 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Chd3B1AR17 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Gm22138-201ENSMUST00000158748 128 ntBASIC11.55□□□□□ -0.56
Chd3B1AR17 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.55□□□□□ -0.56
Chd3B1AR17 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.55□□□□□ -0.56
Chd3B1AR17 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.55□□□□□ -0.56
Chd3B1AR17 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Chd3B1AR17 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.55□□□□□ -0.56
Chd3B1AR17 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.55□□□□□ -0.56
Chd3B1AR17 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.55□□□□□ -0.56
Chd3B1AR17 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.55□□□□□ -0.56
Chd3B1AR17 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.55□□□□□ -0.56
Chd3B1AR17 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Chd3B1AR17 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.55□□□□□ -0.56
Chd3B1AR17 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Chd3B1AR17 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Chd3B1AR17 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Chd3B1AR17 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Chd3B1AR17 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.55□□□□□ -0.56
Chd3B1AR17 Gm20495-201ENSMUST00000173902 235 ntBASIC11.55□□□□□ -0.56
Chd3B1AR17 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms