Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Gm43656-201ENSMUST00000197882 434 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC2.58□□□□□ -2
Gm4559A4IF42 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm43345-201ENSMUST00000199484 269 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm42557-201ENSMUST00000202037 582 ntTSL 3 BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm44017-201ENSMUST00000203231 740 ntTSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm19764-201ENSMUST00000203630 649 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm18838-201ENSMUST00000204855 886 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Gm44538-201ENSMUST00000205615 348 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm19091-201ENSMUST00000208120 978 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Gm45365-201ENSMUST00000209489 256 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Gm8168-201ENSMUST00000209631 948 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Cyp2e1-203ENSMUST00000210235 1012 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm7380-201ENSMUST00000211599 466 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Gm7943-201ENSMUST00000212078 1034 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Calb2-202ENSMUST00000212297 1080 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm8940-201ENSMUST00000212585 219 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 AC167234.1-201ENSMUST00000219929 279 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm8785-201ENSMUST00000220259 487 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 AC158521.1-202ENSMUST00000224352 645 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 AC154335.1-201ENSMUST00000224744 395 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC2.58□□□□□ -2
Gm4559A4IF42 AC154335.2-201ENSMUST00000225916 638 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 AC124569.2-201ENSMUST00000225998 818 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 AC124715.1-201ENSMUST00000228480 754 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Copg1-201ENSMUST00000049966 921 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC2.58□□□□□ -2
Gm4559A4IF42 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm5341-201ENSMUST00000058881 489 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC2.58□□□□□ -2
Gm4559A4IF42 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC2.58□□□□□ -2
Gm4559A4IF42 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC2.58□□□□□ -2
Gm4559A4IF42 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm9988-201ENSMUST00000069786 435 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC2.58□□□□□ -2
Gm4559A4IF42 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm10092-201ENSMUST00000077110 180 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm23293-201ENSMUST00000082552 104 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Gm25404-201ENSMUST00000082970 107 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Mir34c-201ENSMUST00000083653 77 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Olfr519-201ENSMUST00000084752 960 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Gm9386-201ENSMUST00000095195 381 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm10812-201ENSMUST00000099864 546 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm10118-201ENSMUST00000079279 2569 ntAPPRIS P1 BASIC2.58□□□□□ -2
Gm4559A4IF42 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 A630001O12Rik-201ENSMUST00000212914 2182 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Gfra2-203ENSMUST00000227697 1323 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC2.58□□□□□ -2
Gm4559A4IF42 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Gm4559A4IF42 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gm7988-201ENSMUST00000196623 2297 ntBASIC2.58□□□□□ -2
Gm4559A4IF42 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
Gm4559A4IF42 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms