Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Tubb1A2AQ07 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb1A2AQ07 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Gm14381-201ENSMUST00000122105 414 ntBASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Gm17376-201ENSMUST00000166016 84 ntBASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Gm4310-201ENSMUST00000177847 889 ntBASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Gm37666-201ENSMUST00000194110 866 ntBASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Erich3-203ENSMUST00000189969 3460 ntBASIC12.05□□□□□ -0.48
Tubb1A2AQ07 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Gm22133-201ENSMUST00000102082 109 ntBASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Gm11660-201ENSMUST00000120955 412 ntBASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Gm7584-201ENSMUST00000175829 940 ntBASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Gm27530-201ENSMUST00000184096 98 ntBASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Gm3961-201ENSMUST00000204425 994 ntBASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Gm45331-201ENSMUST00000209868 554 ntBASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Gm9797-202ENSMUST00000218003 294 ntBASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb1A2AQ07 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb1A2AQ07 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb1A2AQ07 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb1A2AQ07 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb1A2AQ07 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb1A2AQ07 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb1A2AQ07 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.03□□□□□ -0.48
Tubb1A2AQ07 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb1A2AQ07 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Tubb1A2AQ07 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb1A2AQ07 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb1A2AQ07 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tubb1A2AQ07 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms