Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Bcorl1-203ENSMUST00000136348 7446 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 AC125409.1-201ENSMUST00000223213 3370 ntBASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Gm15703-201ENSMUST00000120250 880 ntBASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Gm12201-201ENSMUST00000120657 1234 ntBASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Gm14719-201ENSMUST00000121891 340 ntBASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Gm45195-201ENSMUST00000205597 1008 ntBASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Gm18307-201ENSMUST00000206864 949 ntBASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Gm6560-201ENSMUST00000198588 1591 ntBASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trav8-1A0A075B641 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Tsc2-203ENSMUST00000226284 6266 ntAPPRIS ALT2 BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Gm38049-201ENSMUST00000195698 1372 ntBASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Gm12151-201ENSMUST00000121374 290 ntBASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Rmrp-201ENSMUST00000157463 271 ntBASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Mir6956-201ENSMUST00000183598 62 ntBASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Trav8-1A0A075B641 Gm6652-201ENSMUST00000186414 1070 ntBASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms