Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Gm14130-201ENSMUST00000118417 987 ntBASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Gm11960-201ENSMUST00000122068 925 ntBASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Gm8343-201ENSMUST00000182705 994 ntBASIC11.8□□□□□ -0.52
H2afb2S4R1M3 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Gm38314-201ENSMUST00000195709 625 ntBASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Rgr-203ENSMUST00000225070 4704 ntBASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
H2afb2S4R1M3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Gm44262-201ENSMUST00000204969 372 ntBASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Gm45433-201ENSMUST00000209386 247 ntBASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
H2afb2S4R1M3 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms