Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Smarcb1Q9Z0H3 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcb1Q9Z0H3 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcb1Q9Z0H3 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.27□□□□□ -0.44
Smarcb1Q9Z0H3 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcb1Q9Z0H3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Smarcb1Q9Z0H3 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcb1Q9Z0H3 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcb1Q9Z0H3 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.27□□□□□ -0.44
Smarcb1Q9Z0H3 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcb1Q9Z0H3 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcb1Q9Z0H3 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.27□□□□□ -0.44
Smarcb1Q9Z0H3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Smarcb1Q9Z0H3 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Smarcb1Q9Z0H3 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Gm13888-201ENSMUST00000119148 422 ntBASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Gm11836-201ENSMUST00000121022 441 ntBASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Gm14665-201ENSMUST00000122294 557 ntBASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Gm8285-201ENSMUST00000208293 759 ntBASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Smarcb1Q9Z0H3 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Gm8459-201ENSMUST00000162504 760 ntBASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Gm3551-201ENSMUST00000190750 664 ntBASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Gm9645-201ENSMUST00000197131 792 ntBASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Gm44545-201ENSMUST00000208262 746 ntBASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
Smarcb1Q9Z0H3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms