Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Scn8aQ9WTU3 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Matn2-203ENSMUST00000226766 3252 ntBASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Gm15549-201ENSMUST00000121595 622 ntBASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Gm26047-201ENSMUST00000157308 113 ntBASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Mir7076-201ENSMUST00000183519 74 ntBASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Gm26047-202ENSMUST00000198840 115 ntBASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Gm42997-202ENSMUST00000200321 985 ntBASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Olfr584-201ENSMUST00000098210 964 ntBASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Gm4900-201ENSMUST00000222046 1628 ntBASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Scn8aQ9WTU3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Gm45856-201ENSMUST00000212752 416 ntBASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Gm23105-201ENSMUST00000083719 134 ntBASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Gm14395-201ENSMUST00000120494 563 ntBASIC11.81□□□□□ -0.52
Scn8aQ9WTU3 Gm14460-201ENSMUST00000121511 639 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms