Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Gm22711-201ENSMUST00000116890 133 ntBASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Gm20495-201ENSMUST00000173902 235 ntBASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Gm37648-201ENSMUST00000192072 2563 ntBASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Tubd1Q9R1K7 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Gm13809-201ENSMUST00000117921 597 ntBASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Mir6927-201ENSMUST00000184494 71 ntBASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tubd1Q9R1K7 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tubd1Q9R1K7 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tubd1Q9R1K7 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tubd1Q9R1K7 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tubd1Q9R1K7 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.96□□□□□ -0.5
Tubd1Q9R1K7 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tubd1Q9R1K7 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Gm23251-201ENSMUST00000103773 110 ntBASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.95□□□□□ -0.5
Tubd1Q9R1K7 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms