Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Gm5308-201ENSMUST00000196752 1354 ntBASIC13.8□□□□□ -0.2
Scn11aQ9R053 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.8□□□□□ -0.2
Scn11aQ9R053 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Gm7985-201ENSMUST00000183329 981 ntBASIC13.8□□□□□ -0.2
Scn11aQ9R053 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Gm29067-201ENSMUST00000190821 470 ntBASIC13.8□□□□□ -0.2
Scn11aQ9R053 Gm30946-201ENSMUST00000198288 724 ntBASIC13.8□□□□□ -0.2
Scn11aQ9R053 Gm9353-201ENSMUST00000200472 604 ntBASIC13.8□□□□□ -0.2
Scn11aQ9R053 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.8□□□□□ -0.2
Scn11aQ9R053 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn11aQ9R053 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scn11aQ9R053 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Scn11aQ9R053 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Scn11aQ9R053 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Gm45527-201ENSMUST00000211052 774 ntBASIC13.79□□□□□ -0.2
Scn11aQ9R053 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC13.79□□□□□ -0.2
Scn11aQ9R053 CT030652.1-201ENSMUST00000227377 1235 ntBASIC13.79□□□□□ -0.2
Scn11aQ9R053 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.79□□□□□ -0.2
Scn11aQ9R053 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scn11aQ9R053 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.78□□□□□ -0.2
Scn11aQ9R053 Gm6390-201ENSMUST00000215034 589 ntBASIC13.78□□□□□ -0.2
Scn11aQ9R053 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Gm13117-201ENSMUST00000120894 691 ntBASIC13.78□□□□□ -0.2
Scn11aQ9R053 Gm13284-201ENSMUST00000121020 547 ntBASIC13.78□□□□□ -0.2
Scn11aQ9R053 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn11aQ9R053 Gm26976-201ENSMUST00000182929 908 ntBASIC13.78□□□□□ -0.2
Scn11aQ9R053 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms