Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
Crlf1Q9JM58 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Crlf1Q9JM58 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Crlf1Q9JM58 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Crlf1Q9JM58 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Crlf1Q9JM58 AC126257.1-201ENSMUST00000213195 1536 ntBASIC9.51□□□□□ -0.89
Crlf1Q9JM58 AC130823.1-201ENSMUST00000228929 1549 ntBASIC9.51□□□□□ -0.89
Crlf1Q9JM58 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Crlf1Q9JM58 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Crlf1Q9JM58 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Crlf1Q9JM58 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Crlf1Q9JM58 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Crlf1Q9JM58 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Crlf1Q9JM58 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Crlf1Q9JM58 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Crlf1Q9JM58 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Gm9924-202ENSMUST00000192760 2311 ntBASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Gm8617-201ENSMUST00000118796 2222 ntBASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Gm11957-201ENSMUST00000118304 779 ntBASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Gm6322-201ENSMUST00000118789 1004 ntBASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Gm12337-201ENSMUST00000119634 400 ntBASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Gm11244-201ENSMUST00000121243 237 ntBASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Ccndbp1-208ENSMUST00000171260 1187 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Mir6973a-201ENSMUST00000183646 78 ntBASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Gm43380-201ENSMUST00000200421 220 ntBASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Gm45592-201ENSMUST00000209605 1043 ntBASIC9.5□□□□□ -0.89
Crlf1Q9JM58 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Gm4930-201ENSMUST00000219926 1087 ntBASIC9.5□□□□□ -0.89
Crlf1Q9JM58 CT009546.1-201ENSMUST00000222573 1120 ntBASIC9.5□□□□□ -0.89
Crlf1Q9JM58 CT009527.1-201ENSMUST00000224205 339 ntBASIC9.5□□□□□ -0.89
Crlf1Q9JM58 CT030652.1-201ENSMUST00000227377 1235 ntBASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Zfp125-201ENSMUST00000079237 2488 ntBASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Gm18294-201ENSMUST00000176980 1748 ntBASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Crlf1Q9JM58 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 AC166574.4-201ENSMUST00000227165 1937 ntBASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Crlf1Q9JM58 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms