Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sec61a2Q9JLR1 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Mir877-201ENSMUST00000104738 85 ntBASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Gm25668-201ENSMUST00000157700 129 ntBASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Gm25890-201ENSMUST00000177643 165 ntBASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Gm22614-201ENSMUST00000178300 165 ntBASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Gm38317-201ENSMUST00000195564 343 ntBASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Gm18056-201ENSMUST00000207670 568 ntBASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Gm18061-201ENSMUST00000208350 562 ntBASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Gm18063-201ENSMUST00000208529 568 ntBASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Gm18052-201ENSMUST00000208750 559 ntBASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Gm22042-201ENSMUST00000082989 165 ntBASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Gm26110-201ENSMUST00000083971 165 ntBASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Sec61a2Q9JLR1 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a2Q9JLR1 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.65□□□□□ -0.7
Sec61a2Q9JLR1 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a2Q9JLR1 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a2Q9JLR1 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a2Q9JLR1 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a2Q9JLR1 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a2Q9JLR1 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.65□□□□□ -0.7
Sec61a2Q9JLR1 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a2Q9JLR1 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a2Q9JLR1 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a2Q9JLR1 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.65□□□□□ -0.7
Sec61a2Q9JLR1 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a2Q9JLR1 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a2Q9JLR1 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Sec61a2Q9JLR1 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.65□□□□□ -0.7
Sec61a2Q9JLR1 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.65□□□□□ -0.7
Sec61a2Q9JLR1 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Sec61a2Q9JLR1 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.65□□□□□ -0.7
Sec61a2Q9JLR1 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.65□□□□□ -0.7
Sec61a2Q9JLR1 Gm25700-201ENSMUST00000177693 110 ntBASIC10.65□□□□□ -0.7
Sec61a2Q9JLR1 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms