Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Gm23200-201ENSMUST00000104379 132 ntBASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Mir7677-201ENSMUST00000184226 67 ntBASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Gm4157-201ENSMUST00000211647 679 ntBASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Gm26448-201ENSMUST00000082446 203 ntBASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Chmp2aQ9DB34 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Gm26286-201ENSMUST00000104166 134 ntBASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Gm11509-201ENSMUST00000117358 325 ntBASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Gm12036-201ENSMUST00000120008 530 ntBASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Gm18038-201ENSMUST00000197900 485 ntBASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Gm807-202ENSMUST00000224929 408 ntBASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Chmp2aQ9DB34 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Chmp2aQ9DB34 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms