Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Gm16166-201ENSMUST00000118291 787 ntBASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Gm7150-201ENSMUST00000122032 981 ntBASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Stag1Q9D3E6 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Stag1Q9D3E6 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Stag1Q9D3E6 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.08□□□□□ -0.15
Stag1Q9D3E6 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Stag1Q9D3E6 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
Stag1Q9D3E6 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Stag1Q9D3E6 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Stag1Q9D3E6 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Gm12899-201ENSMUST00000120565 551 ntBASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Mir1901-201ENSMUST00000122616 78 ntBASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Gm44329-201ENSMUST00000197469 112 ntBASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 AC132901.1-201ENSMUST00000224345 508 ntBASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Stag1Q9D3E6 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Stag1Q9D3E6 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Stag1Q9D3E6 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Stag1Q9D3E6 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Stag1Q9D3E6 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Stag1Q9D3E6 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Stag1Q9D3E6 Gm25076-201ENSMUST00000104098 132 ntBASIC14.07□□□□□ -0.16
Stag1Q9D3E6 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Stag1Q9D3E6 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC14.07□□□□□ -0.16
Stag1Q9D3E6 Gm3551-201ENSMUST00000190750 664 ntBASIC14.07□□□□□ -0.16
Stag1Q9D3E6 Gm9136-201ENSMUST00000193368 454 ntBASIC14.07□□□□□ -0.16
Stag1Q9D3E6 Gm37458-201ENSMUST00000194055 410 ntBASIC14.07□□□□□ -0.16
Stag1Q9D3E6 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Stag1Q9D3E6 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC14.07□□□□□ -0.16
Stag1Q9D3E6 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Stag1Q9D3E6 Mirlet7i-201ENSMUST00000083472 85 ntBASIC14.07□□□□□ -0.16
Stag1Q9D3E6 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Stag1Q9D3E6 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Stag1Q9D3E6 Gm13384-201ENSMUST00000117166 1344 ntBASIC14.07□□□□□ -0.16
Stag1Q9D3E6 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Stag1Q9D3E6 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.07□□□□□ -0.16
Stag1Q9D3E6 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Stag1Q9D3E6 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms