Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chaf1bQ9D0N7 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chaf1bQ9D0N7 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.08□□□□□ -0.64
Chaf1bQ9D0N7 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chaf1bQ9D0N7 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chaf1bQ9D0N7 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Chaf1bQ9D0N7 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chaf1bQ9D0N7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chaf1bQ9D0N7 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chaf1bQ9D0N7 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chaf1bQ9D0N7 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chaf1bQ9D0N7 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.08□□□□□ -0.64
Chaf1bQ9D0N7 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chaf1bQ9D0N7 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Gm3890-201ENSMUST00000182416 207 ntBASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Gm17931-201ENSMUST00000208132 634 ntBASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Chaf1bQ9D0N7 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Gm42693-201ENSMUST00000196779 631 ntBASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Gm43818-201ENSMUST00000200605 466 ntBASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.06□□□□□ -0.64
Chaf1bQ9D0N7 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms