Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.15□□□□□ -0.46
Snf8Q9CZ28 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Gm23931-201ENSMUST00000103842 109 ntBASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.15□□□□□ -0.46
Snf8Q9CZ28 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 BC043934-202ENSMUST00000185694 2356 ntBASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Snf8Q9CZ28 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Snf8Q9CZ28 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Snf8Q9CZ28 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Snf8Q9CZ28 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Snf8Q9CZ28 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.14□□□□□ -0.47
Snf8Q9CZ28 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Gm5187-201ENSMUST00000117317 991 ntBASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Gm11960-201ENSMUST00000122068 925 ntBASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 AY702102-202ENSMUST00000194651 1173 ntBASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Snf8Q9CZ28 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.13□□□□□ -0.47
Snf8Q9CZ28 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snf8Q9CZ28 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.13□□□□□ -0.47
Snf8Q9CZ28 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Snf8Q9CZ28 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Snf8Q9CZ28 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snf8Q9CZ28 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snf8Q9CZ28 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Snf8Q9CZ28 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.13□□□□□ -0.47
Snf8Q9CZ28 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Snf8Q9CZ28 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snf8Q9CZ28 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Snf8Q9CZ28 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Snf8Q9CZ28 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.13□□□□□ -0.47
Snf8Q9CZ28 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Snf8Q9CZ28 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.13□□□□□ -0.47
Snf8Q9CZ28 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.13□□□□□ -0.47
Snf8Q9CZ28 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.13□□□□□ -0.47
Snf8Q9CZ28 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms