Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ddx47Q9CWX9 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ddx47Q9CWX9 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Ddx47Q9CWX9 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Ddx47Q9CWX9 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ddx47Q9CWX9 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Ddx47Q9CWX9 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ddx47Q9CWX9 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ddx47Q9CWX9 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Gm14999-201ENSMUST00000121039 624 ntBASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Gm8738-201ENSMUST00000172606 329 ntBASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Gm26927-201ENSMUST00000182385 965 ntBASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Gm7653-201ENSMUST00000214567 508 ntBASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Gm37613-201ENSMUST00000195677 3580 ntBASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Rgr-203ENSMUST00000225070 4704 ntBASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ddx47Q9CWX9 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Gm38241-201ENSMUST00000192641 898 ntBASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Gm45384-201ENSMUST00000210451 277 ntBASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ddx47Q9CWX9 AC154171.2-201ENSMUST00000225219 2652 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms