Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Otud1Q9CUB6 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Mir669o-201ENSMUST00000103898 96 ntBASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Gm25109-201ENSMUST00000122474 114 ntBASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Gm19212-201ENSMUST00000216642 862 ntBASIC11.29□□□□□ -0.6
Otud1Q9CUB6 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Gm272-201ENSMUST00000222073 919 ntBASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Nsd1-205ENSMUST00000224693 852 ntBASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Spcs1-203ENSMUST00000226374 592 ntBASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Otud1Q9CUB6 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Gm23251-201ENSMUST00000103773 110 ntBASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Gm7851-201ENSMUST00000117574 323 ntBASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Gm13313-201ENSMUST00000118938 1084 ntBASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Gm8199-201ENSMUST00000121323 823 ntBASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Otud1Q9CUB6 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms