Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rpa3Q9CQ71 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Gm15711-201ENSMUST00000118889 535 ntBASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Gm2383-201ENSMUST00000181461 807 ntBASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Gm45186-201ENSMUST00000206874 478 ntBASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Gm18730-201ENSMUST00000218038 343 ntBASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Gm270-201ENSMUST00000223010 976 ntBASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Gm26448-201ENSMUST00000082446 203 ntBASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rpa3Q9CQ71 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 Gm12380-201ENSMUST00000119012 544 ntBASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
Rpa3Q9CQ71 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.48□□□□□ -0.41
Rpa3Q9CQ71 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms