Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim11Q99PQ2 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Gm43758-201ENSMUST00000199500 367 ntBASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.46□□□□□ -0.25
Trim11Q99PQ2 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim11Q99PQ2 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim11Q99PQ2 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Trim11Q99PQ2 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim11Q99PQ2 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trim11Q99PQ2 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim11Q99PQ2 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim11Q99PQ2 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trim11Q99PQ2 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim11Q99PQ2 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim11Q99PQ2 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim11Q99PQ2 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Gm26286-201ENSMUST00000104166 134 ntBASIC13.45□□□□□ -0.26
Trim11Q99PQ2 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Gm15004-201ENSMUST00000119192 630 ntBASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Gm11660-201ENSMUST00000120955 412 ntBASIC13.45□□□□□ -0.26
Trim11Q99PQ2 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 AA914427-201ENSMUST00000193194 1166 ntBASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Gm38317-201ENSMUST00000195564 343 ntBASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Gm37102-201ENSMUST00000195740 1105 ntBASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Gm43822-201ENSMUST00000200285 476 ntBASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim11Q99PQ2 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trim11Q99PQ2 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms