Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Gm25043-201ENSMUST00000158604 212 ntBASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Gm27514-201ENSMUST00000183692 110 ntBASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim8Q99PJ2 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Gm22018-201ENSMUST00000104357 131 ntBASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Gm5706-201ENSMUST00000181525 993 ntBASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Gm28882-201ENSMUST00000185504 314 ntBASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Gm45880-201ENSMUST00000213041 853 ntBASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Tmem56-207ENSMUST00000155309 2230 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.59□□□□□ -0.55
Trim8Q99PJ2 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim8Q99PJ2 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trim8Q99PJ2 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trim8Q99PJ2 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trim8Q99PJ2 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Trim8Q99PJ2 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trim8Q99PJ2 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trim8Q99PJ2 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim8Q99PJ2 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms