Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdh15Q99PJ1 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdh15Q99PJ1 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh15Q99PJ1 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC13.05□□□□□ -0.32
Pcdh15Q99PJ1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh15Q99PJ1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh15Q99PJ1 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC13.05□□□□□ -0.32
Pcdh15Q99PJ1 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh15Q99PJ1 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC13.05□□□□□ -0.32
Pcdh15Q99PJ1 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdh15Q99PJ1 Gm43460-201ENSMUST00000202491 1057 ntBASIC13.05□□□□□ -0.32
Pcdh15Q99PJ1 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh15Q99PJ1 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh15Q99PJ1 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.05□□□□□ -0.32
Pcdh15Q99PJ1 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Pcdh15Q99PJ1 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13.05□□□□□ -0.32
Pcdh15Q99PJ1 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Gm6755-201ENSMUST00000100598 864 ntBASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Gm6740-201ENSMUST00000100617 864 ntBASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Gm6441-201ENSMUST00000120983 696 ntBASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Gm5976-201ENSMUST00000180794 996 ntBASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Gm4753-201ENSMUST00000188327 1255 ntBASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Gm7445-201ENSMUST00000192115 340 ntBASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 AC124613.1-201ENSMUST00000198711 88 ntBASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Gm44008-201ENSMUST00000204345 412 ntBASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh15Q99PJ1 Gm24933-201ENSMUST00000103762 110 ntBASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Gm23252-201ENSMUST00000103776 110 ntBASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Gm11473-201ENSMUST00000118980 359 ntBASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Gm26443-201ENSMUST00000179610 110 ntBASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Gm8226-201ENSMUST00000190511 798 ntBASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 AC107752.1-201ENSMUST00000219362 469 ntBASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 AC154477.1-201ENSMUST00000226515 773 ntBASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 AC137842.2-201ENSMUST00000227734 797 ntBASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Gm14005-209ENSMUST00000224993 1832 ntBASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Zcwpw2-203ENSMUST00000187803 372 ntBASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Gm6352-201ENSMUST00000203583 1134 ntBASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh15Q99PJ1 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms