Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Gm23931-201ENSMUST00000103842 109 ntBASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Gm7113-201ENSMUST00000120477 958 ntBASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Gm25295-201ENSMUST00000122794 306 ntBASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Gm17063-201ENSMUST00000168135 456 ntBASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Gm8902-201ENSMUST00000174341 1096 ntBASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Gm29036-201ENSMUST00000189967 877 ntBASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Gm8480-201ENSMUST00000190350 698 ntBASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Gm44061-201ENSMUST00000203962 1195 ntBASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Pcdhb3Q91XZ7 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Gm5187-201ENSMUST00000117317 991 ntBASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Gm2231-201ENSMUST00000125661 612 ntBASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Gm9499-201ENSMUST00000180888 964 ntBASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Gm27427-201ENSMUST00000185134 193 ntBASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Gm37497-201ENSMUST00000195830 798 ntBASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Gm29755-201ENSMUST00000196976 948 ntBASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Gm4803-201ENSMUST00000218729 1279 ntBASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.06□□□□□ -0.48
Pcdhb3Q91XZ7 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdhb3Q91XZ7 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms