Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Mir8093-201ENSMUST00000185043 137 ntBASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Gm3332-201ENSMUST00000189337 928 ntBASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Gm5982-201ENSMUST00000196234 512 ntBASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Lect2-202ENSMUST00000225183 823 ntBASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb6Q91XZ4 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Gm23596-201ENSMUST00000104304 132 ntBASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Gm12857-201ENSMUST00000117678 592 ntBASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb6Q91XZ4 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Mir877-201ENSMUST00000104738 85 ntBASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Gm807-202ENSMUST00000224929 408 ntBASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Gm8420-201ENSMUST00000097103 598 ntBASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb6Q91XZ4 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms