Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 AC124433.1-202ENSMUST00000224762 1535 ntBASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Gm23596-201ENSMUST00000104304 132 ntBASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Gm13045-201ENSMUST00000119019 712 ntBASIC13.6□□□□□ -0.23
Ddx41Q91VN6 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Gm9211-201ENSMUST00000182882 975 ntBASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Gm37444-201ENSMUST00000193605 439 ntBASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Gm18711-201ENSMUST00000199341 750 ntBASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Gm4607-201ENSMUST00000206649 577 ntBASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Gm7207-201ENSMUST00000211575 1067 ntBASIC13.6□□□□□ -0.23
Ddx41Q91VN6 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 CT571245.2-201ENSMUST00000218421 305 ntBASIC13.6□□□□□ -0.23
Ddx41Q91VN6 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.6□□□□□ -0.23
Ddx41Q91VN6 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Gm21811-201ENSMUST00000096485 930 ntBASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Ddx41Q91VN6 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Gm14058-201ENSMUST00000116082 735 ntBASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Gm6506-201ENSMUST00000119775 1136 ntBASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Gm25881-201ENSMUST00000157783 103 ntBASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Gm19353-201ENSMUST00000184561 445 ntBASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ddx41Q91VN6 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.58□□□□□ -0.23
Ddx41Q91VN6 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ddx41Q91VN6 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.58□□□□□ -0.23
Ddx41Q91VN6 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
Ddx41Q91VN6 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ddx41Q91VN6 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ddx41Q91VN6 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ddx41Q91VN6 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms