Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Gm18227-201ENSMUST00000211082 1468 ntBASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 AC117608.2-201ENSMUST00000224124 1363 ntBASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Gm15370-201ENSMUST00000117158 253 ntBASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Gm12241-201ENSMUST00000118330 726 ntBASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Gm13461-201ENSMUST00000120980 662 ntBASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Gm11358-201ENSMUST00000122310 373 ntBASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Gm11871-201ENSMUST00000122429 1061 ntBASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Gm2546-201ENSMUST00000182630 991 ntBASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Gm9368-201ENSMUST00000219348 831 ntBASIC13□□□□□ -0.33
Pcdhb17Q91VD8 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13□□□□□ -0.33
Pcdhb17Q91VD8 AC131117.2-203ENSMUST00000225886 950 ntBASIC13□□□□□ -0.33
Pcdhb17Q91VD8 AC107711.1-201ENSMUST00000227258 1295 ntBASIC13□□□□□ -0.33
Pcdhb17Q91VD8 AC080021.1-201ENSMUST00000228104 700 ntBASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Mir350-201ENSMUST00000083639 99 ntBASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb17Q91VD8 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Prl3a1-201ENSMUST00000049463 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Gm17164-201ENSMUST00000169013 506 ntBASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Gm23617-201ENSMUST00000175410 95 ntBASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Pcdhb17Q91VD8 Gm37439-201ENSMUST00000193150 856 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms