Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Gm23596-201ENSMUST00000104304 132 ntBASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Gm14028-201ENSMUST00000117434 479 ntBASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Gm27530-201ENSMUST00000184096 98 ntBASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Gm29199-201ENSMUST00000187766 775 ntBASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Gm3332-201ENSMUST00000189337 928 ntBASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Gm18730-201ENSMUST00000218038 343 ntBASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 AC155266.1-201ENSMUST00000220762 904 ntBASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb11Q91UZ8 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Gm14277-201ENSMUST00000121195 360 ntBASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Gm4310-201ENSMUST00000177847 889 ntBASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Gm35638-201ENSMUST00000220724 652 ntBASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Gm807-202ENSMUST00000224929 408 ntBASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Pcdhb11Q91UZ8 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms