Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.21□□□□□ -0.45
Trim60Q8VI40 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim60Q8VI40 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Gm11511-201ENSMUST00000118146 540 ntBASIC12.21□□□□□ -0.45
Trim60Q8VI40 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.21□□□□□ -0.45
Trim60Q8VI40 Gm29396-201ENSMUST00000185659 716 ntBASIC12.21□□□□□ -0.45
Trim60Q8VI40 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Gm45880-201ENSMUST00000213041 853 ntBASIC12.21□□□□□ -0.45
Trim60Q8VI40 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.21□□□□□ -0.45
Trim60Q8VI40 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim60Q8VI40 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim60Q8VI40 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim60Q8VI40 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim60Q8VI40 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trim60Q8VI40 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trim60Q8VI40 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trim60Q8VI40 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.21□□□□□ -0.46
Trim60Q8VI40 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.2□□□□□ -0.46
Trim60Q8VI40 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim60Q8VI40 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Gm12957-201ENSMUST00000117835 377 ntBASIC12.2□□□□□ -0.46
Trim60Q8VI40 Gm11222-201ENSMUST00000119005 738 ntBASIC12.2□□□□□ -0.46
Trim60Q8VI40 Gm13297-201ENSMUST00000120205 934 ntBASIC12.2□□□□□ -0.46
Trim60Q8VI40 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.2□□□□□ -0.46
Trim60Q8VI40 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Gm9192-201ENSMUST00000183221 985 ntBASIC12.2□□□□□ -0.46
Trim60Q8VI40 Gm3096-201ENSMUST00000185770 364 ntBASIC12.2□□□□□ -0.46
Trim60Q8VI40 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Gm19187-201ENSMUST00000206781 892 ntBASIC12.2□□□□□ -0.46
Trim60Q8VI40 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trim60Q8VI40 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.19□□□□□ -0.46
Trim60Q8VI40 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim60Q8VI40 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Gm8956-201ENSMUST00000203939 825 ntBASIC12.19□□□□□ -0.46
Trim60Q8VI40 Gm10608-202ENSMUST00000213924 676 ntBASIC12.19□□□□□ -0.46
Trim60Q8VI40 Gm8712-201ENSMUST00000221090 701 ntBASIC12.19□□□□□ -0.46
Trim60Q8VI40 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.19□□□□□ -0.46
Trim60Q8VI40 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.19□□□□□ -0.46
Trim60Q8VI40 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trim60Q8VI40 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms