Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm18983-201ENSMUST00000222884 2729 ntBASIC15.08■□□□□ 0.01
Chmp7Q8R1T1 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chmp7Q8R1T1 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Chmp7Q8R1T1 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp7Q8R1T1 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Gm25880-201ENSMUST00000104331 132 ntBASIC15.08■□□□□ 0
Chmp7Q8R1T1 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Gm12628-201ENSMUST00000122193 382 ntBASIC15.08■□□□□ 0
Chmp7Q8R1T1 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Gm7741-201ENSMUST00000181445 989 ntBASIC15.08■□□□□ 0
Chmp7Q8R1T1 Gm5100-201ENSMUST00000195631 589 ntBASIC15.08■□□□□ 0
Chmp7Q8R1T1 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Gm4978-201ENSMUST00000071565 801 ntBASIC15.08■□□□□ 0
Chmp7Q8R1T1 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Chmp7Q8R1T1 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Zfp125-201ENSMUST00000079237 2488 ntBASIC15.07■□□□□ 0
Chmp7Q8R1T1 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Gm25063-201ENSMUST00000104666 94 ntBASIC15.07■□□□□ 0
Chmp7Q8R1T1 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Gm15744-201ENSMUST00000161734 213 ntBASIC15.07■□□□□ 0
Chmp7Q8R1T1 Gm6771-201ENSMUST00000182716 1001 ntBASIC15.07■□□□□ 0
Chmp7Q8R1T1 Gm7504-201ENSMUST00000201449 424 ntBASIC15.07■□□□□ 0
Chmp7Q8R1T1 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Chmp7Q8R1T1 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Gm6655-201ENSMUST00000201932 1309 ntBASIC15.07■□□□□ 0
Chmp7Q8R1T1 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Chmp7Q8R1T1 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.06■□□□□ 0
Chmp7Q8R1T1 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp7Q8R1T1 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Gm11340-201ENSMUST00000119226 412 ntBASIC15.06■□□□□ 0
Chmp7Q8R1T1 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp7Q8R1T1 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
Chmp7Q8R1T1 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp7Q8R1T1 AC165154.1-201ENSMUST00000226661 340 ntBASIC15.06■□□□□ 0
Chmp7Q8R1T1 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Gm25517-201ENSMUST00000083865 134 ntBASIC15.06■□□□□ 0
Chmp7Q8R1T1 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC15.06■□□□□ 0
Chmp7Q8R1T1 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms