Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Gm13875-201ENSMUST00000120162 282 ntBASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nudcd3Q8R1N4 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nudcd3Q8R1N4 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nudcd3Q8R1N4 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Nudcd3Q8R1N4 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Nudcd3Q8R1N4 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nudcd3Q8R1N4 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Nudcd3Q8R1N4 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.77□□□□□ -0.52
Nudcd3Q8R1N4 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Nudcd3Q8R1N4 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nudcd3Q8R1N4 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Nudcd3Q8R1N4 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nudcd3Q8R1N4 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nudcd3Q8R1N4 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Gm9794-201ENSMUST00000202370 423 ntBASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Nudcd3Q8R1N4 Snora73a-201ENSMUST00000082453 205 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms