Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.74□□□□□ -0.69
Ebf4Q8K4J2 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Gm37917-201ENSMUST00000194711 392 ntBASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Gm10076-201ENSMUST00000073238 384 ntBASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.73□□□□□ -0.69
Ebf4Q8K4J2 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Gm6473-201ENSMUST00000188572 1210 ntBASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Gm38314-201ENSMUST00000195709 625 ntBASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Gm44405-201ENSMUST00000198952 126 ntBASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 AC135669.1-201ENSMUST00000213585 412 ntBASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ebf4Q8K4J2 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms