Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CopaQ8CIE6 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CopaQ8CIE6 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CopaQ8CIE6 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CopaQ8CIE6 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CopaQ8CIE6 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.11□□□□□ -0.47
CopaQ8CIE6 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm12380-201ENSMUST00000119012 544 ntBASIC12.11□□□□□ -0.47
CopaQ8CIE6 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm12176-201ENSMUST00000121420 875 ntBASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm22902-201ENSMUST00000158488 302 ntBASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm29615-201ENSMUST00000185371 697 ntBASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm28224-201ENSMUST00000186078 697 ntBASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm29001-201ENSMUST00000186177 697 ntBASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm28292-201ENSMUST00000186593 697 ntBASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm28101-201ENSMUST00000187608 697 ntBASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm29076-201ENSMUST00000187689 697 ntBASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm28302-201ENSMUST00000187931 697 ntBASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm28646-201ENSMUST00000188220 697 ntBASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm28205-201ENSMUST00000189177 697 ntBASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm29032-201ENSMUST00000189797 697 ntBASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm28695-201ENSMUST00000190300 697 ntBASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm37448-201ENSMUST00000192795 697 ntBASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm18730-201ENSMUST00000218038 343 ntBASIC12.11□□□□□ -0.47
CopaQ8CIE6 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.11□□□□□ -0.47
CopaQ8CIE6 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.11□□□□□ -0.47
CopaQ8CIE6 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopaQ8CIE6 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Gm24934-201ENSMUST00000103764 111 ntBASIC12.1□□□□□ -0.47
CopaQ8CIE6 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CopaQ8CIE6 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.1□□□□□ -0.47
CopaQ8CIE6 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Gm12266-201ENSMUST00000120311 962 ntBASIC12.1□□□□□ -0.47
CopaQ8CIE6 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.1□□□□□ -0.47
CopaQ8CIE6 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 AY036118-201ENSMUST00000200021 923 ntBASIC12.1□□□□□ -0.47
CopaQ8CIE6 Gm44958-201ENSMUST00000203734 736 ntBASIC12.1□□□□□ -0.47
CopaQ8CIE6 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.1□□□□□ -0.47
CopaQ8CIE6 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopaQ8CIE6 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms