Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc28aQ8CEI3 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28aQ8CEI3 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28aQ8CEI3 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.43□□□□□ -0.42
Ccdc28aQ8CEI3 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc28aQ8CEI3 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28aQ8CEI3 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.43□□□□□ -0.42
Ccdc28aQ8CEI3 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc28aQ8CEI3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ccdc28aQ8CEI3 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 BC043934-202ENSMUST00000185694 2356 ntBASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Gm38314-201ENSMUST00000195709 625 ntBASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc28aQ8CEI3 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Gm11960-201ENSMUST00000122068 925 ntBASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Mospd4-201ENSMUST00000180618 576 ntBASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Gm9192-201ENSMUST00000183221 985 ntBASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Gm807-202ENSMUST00000224929 408 ntBASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc28aQ8CEI3 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms