Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm45865-201ENSMUST00000211815 945 ntBASIC13.18□□□□□ -0.3
Ccdc38Q8CDN8 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.18□□□□□ -0.3
Ccdc38Q8CDN8 Cts7-204ENSMUST00000225321 1257 ntBASIC13.18□□□□□ -0.3
Ccdc38Q8CDN8 Gzmn-202ENSMUST00000225535 989 ntBASIC13.18□□□□□ -0.3
Ccdc38Q8CDN8 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc38Q8CDN8 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc38Q8CDN8 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc38Q8CDN8 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.18□□□□□ -0.3
Ccdc38Q8CDN8 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc38Q8CDN8 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc38Q8CDN8 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.18□□□□□ -0.3
Ccdc38Q8CDN8 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ccdc38Q8CDN8 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc38Q8CDN8 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc38Q8CDN8 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc38Q8CDN8 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc38Q8CDN8 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc38Q8CDN8 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc38Q8CDN8 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc38Q8CDN8 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.18□□□□□ -0.3
Ccdc38Q8CDN8 Gm45828-201ENSMUST00000206938 1836 ntBASIC13.18□□□□□ -0.3
Ccdc38Q8CDN8 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Gm11511-201ENSMUST00000118146 540 ntBASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Gm5455-201ENSMUST00000058710 715 ntBASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.17□□□□□ -0.3
Ccdc38Q8CDN8 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc38Q8CDN8 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Ccdc38Q8CDN8 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc38Q8CDN8 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.15□□□□□ -0.3
Ccdc38Q8CDN8 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ccdc38Q8CDN8 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc38Q8CDN8 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc38Q8CDN8 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms