Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Gm11531-201ENSMUST00000117614 555 ntBASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Gm20482-202ENSMUST00000174729 825 ntBASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Gm31256-201ENSMUST00000194705 506 ntBASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ccdc87Q8CDL9 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Rprl1-201ENSMUST00000158050 327 ntBASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Gm38241-201ENSMUST00000192641 898 ntBASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Gm5950-201ENSMUST00000213337 772 ntBASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ccdc87Q8CDL9 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ccdc87Q8CDL9 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc87Q8CDL9 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.52□□□□□ -0.4
Ccdc87Q8CDL9 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ccdc87Q8CDL9 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Ccdc87Q8CDL9 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc87Q8CDL9 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Ccdc87Q8CDL9 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc87Q8CDL9 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.52□□□□□ -0.4
Ccdc87Q8CDL9 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc87Q8CDL9 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc87Q8CDL9 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.52□□□□□ -0.4
Ccdc87Q8CDL9 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc87Q8CDL9 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ccdc87Q8CDL9 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.52□□□□□ -0.4
Ccdc87Q8CDL9 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ccdc87Q8CDL9 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 Gm15610-201ENSMUST00000120584 195 ntBASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 Gm14726-201ENSMUST00000120623 896 ntBASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 Gm43002-201ENSMUST00000200310 155 ntBASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.52□□□□□ -0.41
Ccdc87Q8CDL9 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms