Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Uba3Q8C878 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Uba3Q8C878 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Uba3Q8C878 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
Uba3Q8C878 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Uba3Q8C878 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Uba3Q8C878 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Uba3Q8C878 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Uba3Q8C878 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.43□□□□□ -0.42
Uba3Q8C878 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.43□□□□□ -0.42
Uba3Q8C878 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.43□□□□□ -0.42
Uba3Q8C878 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Uba3Q8C878 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Uba3Q8C878 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Uba3Q8C878 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Uba3Q8C878 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Uba3Q8C878 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.43□□□□□ -0.42
Uba3Q8C878 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Uba3Q8C878 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.43□□□□□ -0.42
Uba3Q8C878 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.43□□□□□ -0.42
Uba3Q8C878 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Uba3Q8C878 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Uba3Q8C878 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Uba3Q8C878 Gm6114-201ENSMUST00000182472 968 ntBASIC12.43□□□□□ -0.42
Uba3Q8C878 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.43□□□□□ -0.42
Uba3Q8C878 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Uba3Q8C878 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Uba3Q8C878 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Uba3Q8C878 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Uba3Q8C878 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Uba3Q8C878 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.43□□□□□ -0.42
Uba3Q8C878 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Uba3Q8C878 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Uba3Q8C878 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Uba3Q8C878 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Uba3Q8C878 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.43□□□□□ -0.42
Uba3Q8C878 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Uba3Q8C878 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.43□□□□□ -0.42
Uba3Q8C878 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Uba3Q8C878 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Uba3Q8C878 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Uba3Q8C878 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Uba3Q8C878 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Uba3Q8C878 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Uba3Q8C878 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.42□□□□□ -0.42
Uba3Q8C878 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Uba3Q8C878 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Uba3Q8C878 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Uba3Q8C878 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Uba3Q8C878 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.42□□□□□ -0.42
Uba3Q8C878 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Uba3Q8C878 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Uba3Q8C878 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Uba3Q8C878 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Uba3Q8C878 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Uba3Q8C878 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.42□□□□□ -0.42
Uba3Q8C878 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.42□□□□□ -0.42
Uba3Q8C878 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.42□□□□□ -0.42
Uba3Q8C878 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Uba3Q8C878 Gm11663-201ENSMUST00000117888 290 ntBASIC12.42□□□□□ -0.42
Uba3Q8C878 Gm4909-201ENSMUST00000118749 794 ntBASIC12.42□□□□□ -0.42
Uba3Q8C878 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.42□□□□□ -0.42
Uba3Q8C878 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Uba3Q8C878 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.42□□□□□ -0.42
Uba3Q8C878 Gm25732-201ENSMUST00000175168 60 ntBASIC12.42□□□□□ -0.42
Uba3Q8C878 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.42□□□□□ -0.42
Uba3Q8C878 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.42□□□□□ -0.42
Uba3Q8C878 Rps4l-202ENSMUST00000204242 789 ntBASIC12.42□□□□□ -0.42
Uba3Q8C878 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Uba3Q8C878 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Uba3Q8C878 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.42□□□□□ -0.42
Uba3Q8C878 Gm21811-201ENSMUST00000096485 930 ntBASIC12.42□□□□□ -0.42
Uba3Q8C878 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Uba3Q8C878 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Uba3Q8C878 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Uba3Q8C878 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Uba3Q8C878 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Uba3Q8C878 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Uba3Q8C878 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Uba3Q8C878 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Uba3Q8C878 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.42□□□□□ -0.42
Uba3Q8C878 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Uba3Q8C878 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.42□□□□□ -0.42
Uba3Q8C878 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Uba3Q8C878 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Uba3Q8C878 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Uba3Q8C878 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Uba3Q8C878 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Uba3Q8C878 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Uba3Q8C878 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Uba3Q8C878 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Uba3Q8C878 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Uba3Q8C878 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Uba3Q8C878 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Uba3Q8C878 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Uba3Q8C878 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Uba3Q8C878 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Uba3Q8C878 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Uba3Q8C878 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Uba3Q8C878 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms