Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Gm6114-201ENSMUST00000182472 968 ntBASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Gm37299-201ENSMUST00000193951 826 ntBASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Gm9645-201ENSMUST00000197131 792 ntBASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Gm42599-201ENSMUST00000201308 469 ntBASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh3rf2Q8BZT2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Gm27390-201ENSMUST00000184516 176 ntBASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Gm44980-201ENSMUST00000205826 314 ntBASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sh3rf2Q8BZT2 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Gm7150-201ENSMUST00000122032 981 ntBASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Gm21092-201ENSMUST00000178995 955 ntBASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Gm43852-201ENSMUST00000202098 917 ntBASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sh3rf2Q8BZT2 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sh3rf2Q8BZT2 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.96□□□□□ -0.5
Sh3rf2Q8BZT2 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms