Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Gm13097-201ENSMUST00000210722 397 ntBASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trerf1Q8BXJ2 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Gm44826-201ENSMUST00000207648 2332 ntBASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Gm3096-201ENSMUST00000185770 364 ntBASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Gm44124-201ENSMUST00000204159 472 ntBASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Gm43999-201ENSMUST00000204286 2889 ntBASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trerf1Q8BXJ2 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Gm24830-201ENSMUST00000102024 166 ntBASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Gm15236-201ENSMUST00000117309 379 ntBASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Gm25890-201ENSMUST00000177643 165 ntBASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Gm22614-201ENSMUST00000178300 165 ntBASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Gm8885-201ENSMUST00000189382 598 ntBASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Gm22042-201ENSMUST00000082989 165 ntBASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Gm26232-201ENSMUST00000083360 166 ntBASIC12.54□□□□□ -0.4
Trerf1Q8BXJ2 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms