Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm15595-201ENSMUST00000120840 961 ntBASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Gm20426-201ENSMUST00000173657 440 ntBASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Mir3102-201ENSMUST00000175555 104 ntBASIC12.09□□□□□ -0.47
Nup54Q8BTS4 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Mir8093-201ENSMUST00000185043 137 ntBASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Gm45113-201ENSMUST00000207518 165 ntBASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.09□□□□□ -0.47
Nup54Q8BTS4 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Ginm1-202ENSMUST00000065124 300 ntBASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nup54Q8BTS4 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nup54Q8BTS4 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nup54Q8BTS4 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Nup54Q8BTS4 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Gm11331-201ENSMUST00000119764 288 ntBASIC12.08□□□□□ -0.48
Nup54Q8BTS4 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Gm37835-201ENSMUST00000193305 361 ntBASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Gm18753-201ENSMUST00000201000 566 ntBASIC12.08□□□□□ -0.48
Nup54Q8BTS4 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nup54Q8BTS4 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Gm15566-201ENSMUST00000121130 590 ntBASIC12.07□□□□□ -0.48
Nup54Q8BTS4 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms