Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Srrm4Q8BKA3 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Gm7857-201ENSMUST00000117957 358 ntBASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Gm15610-201ENSMUST00000120584 195 ntBASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Srrm4Q8BKA3 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Srrm4Q8BKA3 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Srrm4Q8BKA3 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Srrm4Q8BKA3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Srrm4Q8BKA3 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Srrm4Q8BKA3 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Srrm4Q8BKA3 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Srrm4Q8BKA3 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.25□□□□□ -0.77
Srrm4Q8BKA3 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Srrm4Q8BKA3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Srrm4Q8BKA3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.25□□□□□ -0.77
Srrm4Q8BKA3 Gm4909-201ENSMUST00000118749 794 ntBASIC10.25□□□□□ -0.77
Srrm4Q8BKA3 Gm16481-201ENSMUST00000119074 1227 ntBASIC10.25□□□□□ -0.77
Srrm4Q8BKA3 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.25□□□□□ -0.77
Srrm4Q8BKA3 Gm27552-201ENSMUST00000183351 62 ntBASIC10.25□□□□□ -0.77
Srrm4Q8BKA3 Gm27844-201ENSMUST00000183613 62 ntBASIC10.25□□□□□ -0.77
Srrm4Q8BKA3 Gm28450-201ENSMUST00000187349 638 ntBASIC10.25□□□□□ -0.77
Srrm4Q8BKA3 Gm18038-201ENSMUST00000197900 485 ntBASIC10.25□□□□□ -0.77
Srrm4Q8BKA3 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Srrm4Q8BKA3 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Srrm4Q8BKA3 Gm18730-201ENSMUST00000218038 343 ntBASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms