Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp2bQ8BJF9 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp2bQ8BJF9 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Gm13829-201ENSMUST00000119600 138 ntBASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Mir1982-201ENSMUST00000157368 74 ntBASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Gm38002-201ENSMUST00000193255 180 ntBASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.1□□□□□ -0.47
Chmp2bQ8BJF9 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chmp2bQ8BJF9 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms