Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Gm37333-201ENSMUST00000192904 2251 ntBASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc40Q8BI79 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Gm12036-201ENSMUST00000120008 530 ntBASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Gm14726-201ENSMUST00000120623 896 ntBASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Rprl1-201ENSMUST00000158050 327 ntBASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Gm2991-201ENSMUST00000173338 480 ntBASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Gm6621-201ENSMUST00000193251 772 ntBASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Gm10312-201ENSMUST00000078515 489 ntBASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ccdc40Q8BI79 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ccdc40Q8BI79 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Ccdc40Q8BI79 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Gm31256-201ENSMUST00000194705 506 ntBASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc40Q8BI79 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc40Q8BI79 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms