Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 Gm45706-201ENSMUST00000213063 2136 ntBASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 Gm7082-201ENSMUST00000209880 969 ntBASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Ttc28Q80XJ3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Gm13171-201ENSMUST00000117233 391 ntBASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Gm42430-201ENSMUST00000197209 616 ntBASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Gm4978-201ENSMUST00000071565 801 ntBASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Gm5449-201ENSMUST00000081132 357 ntBASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Gm43854-201ENSMUST00000200418 394 ntBASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Ttc28Q80XJ3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Gm26047-201ENSMUST00000157308 113 ntBASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Gm29304-201ENSMUST00000186555 695 ntBASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Gm29223-201ENSMUST00000188867 695 ntBASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Gm37921-201ENSMUST00000194333 695 ntBASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Gm26047-202ENSMUST00000198840 115 ntBASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Gm6423-201ENSMUST00000204315 934 ntBASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Gm5996-201ENSMUST00000211110 718 ntBASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 AC142266.1-201ENSMUST00000228107 415 ntBASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Ttc28Q80XJ3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms