Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm25880-201ENSMUST00000104331 132 ntBASIC12.95□□□□□ -0.34
Ush1gQ80T11 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.95□□□□□ -0.34
Ush1gQ80T11 Gm11340-201ENSMUST00000119226 412 ntBASIC12.95□□□□□ -0.34
Ush1gQ80T11 Gm15610-201ENSMUST00000120584 195 ntBASIC12.95□□□□□ -0.34
Ush1gQ80T11 Gm15566-201ENSMUST00000121130 590 ntBASIC12.95□□□□□ -0.34
Ush1gQ80T11 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.95□□□□□ -0.34
Ush1gQ80T11 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ush1gQ80T11 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ush1gQ80T11 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Ush1gQ80T11 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ush1gQ80T11 Mir6998-201ENSMUST00000183343 64 ntBASIC12.95□□□□□ -0.34
Ush1gQ80T11 Gm27530-201ENSMUST00000184096 98 ntBASIC12.95□□□□□ -0.34
Ush1gQ80T11 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ush1gQ80T11 Gm29499-201ENSMUST00000189151 486 ntBASIC12.95□□□□□ -0.34
Ush1gQ80T11 Gm28329-201ENSMUST00000191208 689 ntBASIC12.95□□□□□ -0.34
Ush1gQ80T11 Gm29171-201ENSMUST00000191397 486 ntBASIC12.95□□□□□ -0.34
Ush1gQ80T11 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ush1gQ80T11 Gm45575-201ENSMUST00000210283 548 ntBASIC12.95□□□□□ -0.34
Ush1gQ80T11 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ush1gQ80T11 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.95□□□□□ -0.34
Ush1gQ80T11 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ush1gQ80T11 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ush1gQ80T11 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ush1gQ80T11 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ush1gQ80T11 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ush1gQ80T11 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ush1gQ80T11 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ush1gQ80T11 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ush1gQ80T11 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Ush1gQ80T11 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ush1gQ80T11 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ush1gQ80T11 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ush1gQ80T11 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ush1gQ80T11 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ush1gQ80T11 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ush1gQ80T11 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ush1gQ80T11 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ush1gQ80T11 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ush1gQ80T11 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ush1gQ80T11 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.94□□□□□ -0.34
Ush1gQ80T11 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.94□□□□□ -0.34
Ush1gQ80T11 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ush1gQ80T11 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.94□□□□□ -0.34
Ush1gQ80T11 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.94□□□□□ -0.34
Ush1gQ80T11 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ush1gQ80T11 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ush1gQ80T11 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ush1gQ80T11 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.94□□□□□ -0.34
Ush1gQ80T11 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ush1gQ80T11 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ush1gQ80T11 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.94□□□□□ -0.34
Ush1gQ80T11 Gm15595-201ENSMUST00000120840 961 ntBASIC12.94□□□□□ -0.34
Ush1gQ80T11 Gm13182-201ENSMUST00000122241 312 ntBASIC12.94□□□□□ -0.34
Ush1gQ80T11 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.94□□□□□ -0.34
Ush1gQ80T11 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ush1gQ80T11 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.94□□□□□ -0.34
Ush1gQ80T11 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ush1gQ80T11 Gm6407-201ENSMUST00000176468 549 ntBASIC12.94□□□□□ -0.34
Ush1gQ80T11 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.94□□□□□ -0.34
Ush1gQ80T11 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.94□□□□□ -0.34
Ush1gQ80T11 Gm9645-201ENSMUST00000197131 792 ntBASIC12.94□□□□□ -0.34
Ush1gQ80T11 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.94□□□□□ -0.34
Ush1gQ80T11 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ush1gQ80T11 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ush1gQ80T11 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ush1gQ80T11 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ush1gQ80T11 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ush1gQ80T11 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ush1gQ80T11 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ush1gQ80T11 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.93□□□□□ -0.34
Ush1gQ80T11 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ush1gQ80T11 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ush1gQ80T11 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ush1gQ80T11 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ush1gQ80T11 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.93□□□□□ -0.34
Ush1gQ80T11 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.93□□□□□ -0.34
Ush1gQ80T11 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ush1gQ80T11 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ush1gQ80T11 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.93□□□□□ -0.34
Ush1gQ80T11 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ush1gQ80T11 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ush1gQ80T11 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ush1gQ80T11 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ush1gQ80T11 Gm1848-201ENSMUST00000120711 789 ntBASIC12.93□□□□□ -0.34
Ush1gQ80T11 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.93□□□□□ -0.34
Ush1gQ80T11 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.93□□□□□ -0.34
Ush1gQ80T11 Gm42599-201ENSMUST00000201308 469 ntBASIC12.93□□□□□ -0.34
Ush1gQ80T11 Gm44980-201ENSMUST00000205826 314 ntBASIC12.93□□□□□ -0.34
Ush1gQ80T11 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.93□□□□□ -0.34
Ush1gQ80T11 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.93□□□□□ -0.34
Ush1gQ80T11 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ush1gQ80T11 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ush1gQ80T11 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.93□□□□□ -0.34
Ush1gQ80T11 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Ush1gQ80T11 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ush1gQ80T11 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ush1gQ80T11 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ush1gQ80T11 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Ush1gQ80T11 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ush1gQ80T11 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms